<?xml version="1.0" encoding="utf-8"?>
<journal>
<title>Journal of Advances in Medical and Biomedical Research</title>
<title_fa>Journal of Advances in Medical and Biomedical Research</title_fa>
<short_title>J Adv Med Biomed Res</short_title>
<subject>Medical Sciences</subject>
<web_url>http://journal.zums.ac.ir</web_url>
<journal_hbi_system_id>52</journal_hbi_system_id>
<journal_hbi_system_user>journal52</journal_hbi_system_user>
<journal_id_issn>1606-9366</journal_id_issn>
<journal_id_issn_online>2676-6264</journal_id_issn_online>
<journal_id_pii></journal_id_pii>
<journal_id_doi>10.30699/jambr</journal_id_doi>
<journal_id_iranmedex></journal_id_iranmedex>
<journal_id_magiran></journal_id_magiran>
<journal_id_sid></journal_id_sid>
<journal_id_nlai></journal_id_nlai>
<journal_id_science></journal_id_science>
<language>en</language>
<pubdate>
	<type>jalali</type>
	<year>1395</year>
	<month>5</month>
	<day>1</day>
</pubdate>
<pubdate>
	<type>gregorian</type>
	<year>2016</year>
	<month>8</month>
	<day>1</day>
</pubdate>
<volume>24</volume>
<number>107</number>
<publish_type>online</publish_type>
<publish_edition>1</publish_edition>
<article_type>fulltext</article_type>
<articleset>
	<article>


	<language>fa</language>
	<article_id_doi></article_id_doi>
	<title_fa>تعیین گروه‌های فیلوژنتیک و مقاومت آنتی‌بیوتیکی در ایزوله‌های اشریشیاکلی اوروپاتوژنیک و کامنسال جدا شده از شهر زنجان</title_fa>
	<title>Determination of Phylogenetic Groups and Antibiotic Resistance in Uropathogenic and Commensal Escherichia Coli Isolated from Patients in Zanjan City</title>
	<subject_fa></subject_fa>
	<subject></subject>
	<content_type_fa>کارآزمایی بالینی</content_type_fa>
	<content_type>Clinical Trials</content_type>
	<abstract_fa></abstract_fa>
	<abstract>&lt;p&gt;&lt;strong&gt;&lt;em&gt;Background and Objective:&lt;/em&gt;&lt;/strong&gt; &lt;em&gt;Escherichia coli &lt;/em&gt;strains are the major cause of urinary tract infections which belong to the large group of extra-intestinal pathogenic &lt;em&gt;E. coli&lt;/em&gt;. They fall into four main phylogenetic groups: A, B1, B2 and D. The aim of the present study was to determine phylogenetic groups in uropathogenic and commensal &lt;em&gt;Escherichia coli &lt;/em&gt;isolated. Also, due to increase in the rate of antibiotic usage and subsequent drug resistance, this study evaluated the antimicrobial resistance pattern of &lt;em&gt;E. coli &lt;/em&gt;isolated from patients with UTI.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;&lt;em&gt;Materials and Methods&lt;/em&gt;&lt;/strong&gt;&lt;strong&gt;:&lt;/strong&gt; In this cross-sectional study, 137 uropathogenic&lt;em&gt; Escherichia coli &lt;/em&gt;isolates were collected from the clinical specimens of Zanjan hospitals and 50 isolates were collected from healthy adults. After verifying isolates via biochemical methods and extraction of total DNA, Multiplex &lt;a name=&quot;OLE_LINK6&quot;&gt;&lt;/a&gt;&lt;a name=&quot;OLE_LINK5&quot;&gt;PCR&lt;/a&gt; was done by specific primers for phylogenetic grouping. The antibiotic susceptibility test (disk diffusion method) was done according to &lt;a name=&quot;OLE_LINK4&quot;&gt;&lt;/a&gt;&lt;a name=&quot;OLE_LINK3&quot;&gt;CLSI&lt;/a&gt; advice against 13 antibiotics.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;&lt;em&gt;Results&lt;/em&gt;&lt;/strong&gt;&lt;strong&gt;:&lt;/strong&gt; In this study, the highest rates of resistance to antibiotics in UTI isolates were seen against ampicillin (74.5%) and aztreonam (59.1%). Also, the lowest rates of resistance were reported against imipenem (1.5%) and amikacin (10.9%).The distribution of UPEC phy logenetic groups typing marked the highest prevalence in group B2 (67.15 %) , and then in group D (21.17%) and the lowest prevalence in group A (11.68%). Phy logenetic B1 was not observed in uropathogenic isolates. Among the commensal isolates, 52% belonged to phylogenetic group D, 24% to B2, 14% to A, and10% to B1.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;&lt;em&gt;Conclusion&lt;/em&gt;&lt;/strong&gt;&lt;strong&gt;:&lt;/strong&gt; The results indicate the higher prevalence of B2 and D phylogenetic groups in commensal and uropathogenic&lt;em&gt; Escherichia coli&lt;/em&gt; strains in Zanjan&lt;strong&gt;.&lt;/strong&gt;&lt;/p&gt;
&lt;p&gt;&lt;/p&gt;&lt;p&gt;&lt;/p&gt;</abstract>
	<keyword_fa></keyword_fa>
	<keyword>Keywords: Uropathogenic escherichia coli, Commensal, Phylogenrtic groups, Antibiotic resistance, PCR</keyword>
	<start_page>107</start_page>
	<end_page>118</end_page>
	<web_url>http://journal.zums.ac.ir/browse.php?a_code=A-10-4-980&amp;slc_lang=fa&amp;sid=1</web_url>


<author_list>
	<author>
	<first_name>Roya</first_name>
	<middle_name></middle_name>
	<last_name>Sohrabi</last_name>
	<suffix></suffix>
	<first_name_fa>رویا</first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa>سهرابی</last_name_fa>
	<suffix_fa></suffix_fa>
	<email></email>
	<code>5200319475328460053377</code>
	<orcid>5200319475328460053377</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Dept. of Microbiology, Islamic Azad University Zanjan Branch, Zanjan, Iran</affiliation>
	<affiliation_fa>دانشگاه آزاد اسلامی واحد زنجان</affiliation_fa>
	 </author>


	<author>
	<first_name>Habib</first_name>
	<middle_name></middle_name>
	<last_name>Zeighami</last_name>
	<suffix></suffix>
	<first_name_fa>حبیب</first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa>ضیغمی</last_name_fa>
	<suffix_fa></suffix_fa>
	<email>zeighami@zums.ac.ir</email>
	<code>5200319475328460053378</code>
	<orcid>5200319475328460053378</orcid>
	<coreauthor>Yes
</coreauthor>
	<affiliation>Dept. of Microbiology, Faculty of Medicine, Zanjan University of Medical Sciences, Zanjan, Iran</affiliation>
	<affiliation_fa>دانشگاه علوم پزشکی زنجان</affiliation_fa>
	 </author>


</author_list>


	</article>
</articleset>
</journal>
