Volume 19, Issue 75 (4-2011)                   J Adv Med Biomed Res 2011, 19(75): 25-36 | Back to browse issues page

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Jafarian M, Farnia P, Mozafari M, Ahmadi M, Masjiedi M R, Velayati A A. Comparison of the Genetic Convergence Degree of Mycobacterium Tuberculosis (TB) Strains Isolated from Patients Infected with TB by MIRU-VNTR Technique. J Adv Med Biomed Res 2011; 19 (75) :25-36
URL: http://journal.zums.ac.ir/article-1-1489-en.html
1- Islamic Azad University, Jahrom Branch, The Research Center of Mycobacteriology, Jahrom, Iran , mehdijafariandormency@gmail.com
2- Mycobacteriology Research Center , Shahid Beheshti University of Medical Sciences, Tehran, Iran
3- Qom Azad University of Medical Sciences, Qom, Iran
4- The Research Center of TB and Lung Diseases, Shahid Beheshti University of Medical Sciences. Tehran, Iran
Abstract:   (168567 Views)

Background and Objective: In recent decades, epidemiology has significantly been considered in hygienic studies and disease control, and has made a way into all the programs and hygiene policies. By examining the convergence of harmful lineage genetic patterns, the common infectious resources among the patients can be inferred. The purpose of this study was to compare the Mycobacterium Tuberculosis genetic patterns convergence isolated from patients infected with Mycobacterium Tuberculosis by MIRU-VNTR technique.
Materials and Methods: After isolation the samples from Lowenstein Jensen culture environment and taking segregate tests and drug susceptibility, the DNA was extracted using CTAB/Nacl technique. The genetic patterns of lineages were calculated according to 12 loci format with MIRU-VNTR technique. Demographic and molecular information of patients was used for epidemiological purposes.
Results: After performing drug sensitivity test, 65/140 (64/4%) samples fall into MDR, 29 (20/7%) samples in non MDR category, and the rest of them were among drug – sensitive lineages. Lineage genetic pattern analysis indicated that 49 (35%) of samples related to Delhi/CAS, 28 (20%) to Uganda I, 16 (11/4%) to New I, 1 (0.7%) to EAI, 3(2/1%) to Haarlem, and 5(3/5%) to H37RV families.
Conclusion: The genetic pattern convergence comparison exhibited that the most common and variant genetic patterns was seen in Tehran province which were mostly connected to south (from the South of Tehran to Azadi Square) and to the border cities neighboring Afghanistan, Iraq, Turkmenistan and cities with extreme percentage of immigration, all of which signified shared polluted resources among patients.

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Type of Study: Original Research Article |
Received: 2011/06/8 | Accepted: 2014/06/22 | Published: 2014/06/22

References
1. Masjedi MR, Farnia P, Sorooch S, et al. Extensively Drug- Resistant Tuberculosis 2 years of surveillance in Iran. Clin Infec Dis. 2006; 43: 841-7. [DOI:10.1086/507542] [PMID]
2. Van soolingen D. Molecular epidemiology of tuberculosis and other mycobacterial infection, main methodologics and achievements. J Intern Med. 2001; 249: 1-26. [DOI:10.1046/j.1365-2796.2001.00772.x] [PMID]
3. Marhema B, Kurepina N, Bifani P, et al. Molecular epidemiology of tuberculosis: Current insights. J Clin Microbiol. 2006; 19: 658-85. [DOI:10.1128/CMR.00061-05] [PMID] [PMCID]
4. Mazars E, Lesjean S, Banul L, et al. High resolution minisatellite- based typing as a portable approach to global analysis of mycobacterium tuberculosis molecular epidemiology. Natl Acd Sci. 2001; 98: 1901-6. [DOI:10.1073/pnas.98.4.1901] [PMID] [PMCID]
5. Supply P, Lesjean E, Savine K, et al. Automated high-throughput genotyping for the study of global epidemiology of mycobacterium tuberculosis based on mycobacterial interspersed repetitive unit. J Clin Microbial. 2001; 39: 3563-71. [DOI:10.1128/JCM.39.10.3563-3571.2001] [PMID] [PMCID]
6. Supply P, Mazars E, Lesjean S, et al. Variable human minisatellite- like regions in the mycobacterium tuberculosis genoms. J Molecular Microbiol. 2000; 36: 762-71. [DOI:10.1046/j.1365-2958.2000.01905.x] [PMID]
7. Goyal M, Saunders N, Van Embeden AD, et al. Differentiation of mycobacterium tuberculosis isolates by spoligotyping and IS6110 restriction fragment length polymorphism. J Clin M. 1997; 10: 647-651. [DOI:10.1128/JCM.35.3.647-651.1997]
8. Cowan L, Mosher L, Diem L, Massey P, et al. Variable -Number Tandem Repeat typing of Mycobacterium tuberculosis isolate with copy number of IS6110 by using mycobacterial interspersed repetitive unit. J Clin Microbial. 2005; 43: 688-95.
9. Velayati AA, Masjedi MR, Farnia P, et al. Emergence of new forms of totally drug resistant tuberculosis bacilli: super extensively drug resistant tuberculosis or totally drug resistant strains in Iran. Chest. 2009; 136: 420-5. [DOI:10.1378/chest.08-2427] [PMID]
10. Farnia P, Mohammadi F, Masjedi MR, et al. Evaluation of tuberculosis transmission in Tehran: using RFLP and Spoligotyping methods. J Infection. 2004; 49: 94-101. [DOI:10.1016/j.jinf.2003.11.015] [PMID]
11. Farnia P, Tajadin A, Kargar M, et al. Assessment of genetic pattern of mycobacterium TB isolated from Iranian and Afghan TB patients by means of VNTR typing. J Kurdistan Uni Med Sci. 2008; 13: 53-61.
12. Asgharzadeh M, Khakpour M, Kafil HS, et al. Use of mycobacterial interspersed repetitive unit - variable -number tandem repeat typing to study mycbacterium tuberculosis isolates from east Azarbaijan province of Iran. Pakistan J Biol Sci. 2007; 10: 3769-77. [DOI:10.3923/pjbs.2007.3769.3777] [PMID]
13. Valcheva V, Mokrousov I, Rastogi N, et al. Molecular Characterization of mycobacterium tuberculosis isolates from different regions of Bulgaria. J Clin Microbiol. 2008; 46: 1014-18. [DOI:10.1128/JCM.01841-07] [PMID] [PMCID]
14. Supply P, Allix C, Lesjean S, et al. Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable -number tandem repeat typing of mycobacterium tuberculosis. J Clin Microbiol. 2006; 44: 4498-510. [DOI:10.1128/JCM.01392-06] [PMID] [PMCID]
15. Maes M, Kremer K, Van soolingen D, et al. 24- Locus MIRU-VNTR genotyping is a useful tool to study the molecular epidemiology of tuberculosis among Warao Amerindians in Venezuela. J Tuberculosis. 2008; 88: 490-4. [DOI:10.1016/j.tube.2008.04.003] [PMID]
16. Jafarian M, Aghali-Merza M, Farnia M, et al. Synchronous comparison of mycobacterium tuberculosis epidemiology strains by 'MIRU-VNTR' and 'MIRU-VNTR and spoligotyping' technique. J Avicenna Med Biotchnol. 2010; 2: 145-152.
17. Mirsaeidi M, Tabarsi P, Khoshnood K, et al. Treatment of multiple drug-resistant tuberculosis (MDR-TB) in Iran. J Infect Dis. 2005; 9: 317-322. [DOI:10.1016/j.ijid.2004.09.012] [PMID]
18. Farnia P, Masjedi MR, Varahram M, et al. The recent transmission of Mycobacterium tuberculosis strains among Iranian and Afghan relapse case: a DNA fingerprinting using RFLP and spoligotyping. BMC infect DIS. 2008; 8:109-16. [DOI:10.1186/1471-2334-8-109] [PMID] [PMCID]

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